Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGE24312.1 | AGE25388.1 | H045_01180 | H045_06580 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.435 |
| AGE24312.1 | AGE26528.1 | H045_01180 | H045_12315 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.535 |
| AGE24312.1 | AGE26689.1 | H045_01180 | H045_13120 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.785 |
| AGE24312.1 | AGE26691.1 | H045_01180 | H045_13130 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative two-component system response regulator nitrogen regulation protein NR(I); COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.816 |
| AGE24312.1 | AGE27823.1 | H045_01180 | H045_18805 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative GGDEF/EAL domain regulatory protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.491 |
| AGE24312.1 | fliS | H045_01180 | H045_13140 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS. | 0.483 |
| AGE25388.1 | AGE24312.1 | H045_06580 | H045_01180 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.435 |
| AGE25388.1 | AGE26528.1 | H045_06580 | H045_12315 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.995 |
| AGE25388.1 | AGE26667.1 | H045_06580 | H045_13010 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Flagellar synthesis regulator FleN; COG0455 ATPases involved in chromosome partitioning. | 0.620 |
| AGE25388.1 | AGE26689.1 | H045_06580 | H045_13120 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.685 |
| AGE25388.1 | AGE26690.1 | H045_06580 | H045_13125 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Putative two-component system sensor kinase; COG5002 Signal transduction histidine kinase. | 0.553 |
| AGE25388.1 | AGE26691.1 | H045_06580 | H045_13130 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Putative two-component system response regulator nitrogen regulation protein NR(I); COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.685 |
| AGE25388.1 | AGE27823.1 | H045_06580 | H045_18805 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Putative GGDEF/EAL domain regulatory protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.696 |
| AGE25388.1 | flhF | H045_06580 | H045_13015 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Flagellar biosynthesis regulator FlhF; COG1419 Flagellar GTP-binding protein. | 0.950 |
| AGE25388.1 | fliM | H045_06580 | H045_13060 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.957 |
| AGE25388.1 | fliS | H045_06580 | H045_13140 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS. | 0.958 |
| AGE26528.1 | AGE24312.1 | H045_12315 | H045_01180 | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.535 |
| AGE26528.1 | AGE25388.1 | H045_12315 | H045_06580 | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.995 |
| AGE26528.1 | AGE26667.1 | H045_12315 | H045_13010 | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | Flagellar synthesis regulator FleN; COG0455 ATPases involved in chromosome partitioning. | 0.416 |
| AGE26528.1 | AGE26689.1 | H045_12315 | H045_13120 | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.602 |
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